NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE70407 Query DataSets for GSE70407
Status Public on Feb 01, 2016
Title A new MCM modification cycle regulates DNA replication initiation
Organism Saccharomyces cerevisiae
Experiment type Other
Summary The hexameric DNA helicase MCM (Mcm2-7) is a central regulatory target in eukaryotic replication. Chromatin-bound MCM is kept inactive during G1 phase and subsequently activated in S phase to initiate replication. During this transition, the only known chemical change on the Mcm2-7 proteins is the gain of multi-site phosphorylation that promotes recruitment of co-factors. As replication initiation is tied intimately to multiple biological cues, additional changes on these proteins can provide a second regulatory point. Here we describe a new MCM modification cycle mediated by SUMO that enables a negative regulation of replication initiation. We show that all MCM subunits undergo sumoylation upon loading at origins in G1 phase prior to MCM phosphorylation. Then bulk MCM sumoylation is lost as MCM phosphorylation rises. The pattern of MCM sumoylation suggests a negative role in replication. Indeed, increasing MCM sumoylation delays genome-wide replication initiation. Mechanistically, this is partly due to enhancing the recruitment of a conserved phosphatase that delays MCM phosphorylation and activation. By revealing a new MCM modification cycle and its role in replication, our findings suggest a new model, in which MCM sumoylation counterbalances kinase-based regulation to ensure accurate control of replication initiation.
 
Overall design Two sets of samples at are included: 1) set 1 contains 4 reference samples, collected at 0 min, 15 min, 30 min, 40 min post cdc7-4 release; 2) set 2 contains 4 mutant samples, collected at the same time point as the reference. Whole genome sequencing (Illumina HiSeq) was used to access the copy number change and origin firing in the these samples.
 
Contributor(s) Wei L, Zhao X, Zhang T, Xiang J
Citation(s) 26854664
Submission date Jun 30, 2015
Last update date May 15, 2019
Contact name Xiaolan Zhao
E-mail(s) zhaox1@mskcc.org
Phone 212-639-5582
Organization name Memorial Sloan-Kettering Cancer Center
Department Molecular Biology Program
Lab Zhao lab
Street address 430 East 67th Street, RRL 917D
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (8)
GSM1727061 0 min post cdc7-4 release of Mcm6-ctrl cells
GSM1727062 15 min post cdc7-4 release of Mcm6-ctrl cells
GSM1727063 30 min post cdc7-4 release of Mcm6-ctrl cells
Relations
BioProject PRJNA288566
SRA SRP059964

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70407_RAW.tar 3.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap