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| Status |
Public on Mar 08, 2016 |
| Title |
Transcriptome analysis of a Staphylococcus aureus mutant defective in the transcription termination factor Rho. |
| Platform organism |
Staphylococcus aureus subsp. aureus NCTC 8325 |
| Sample organism |
Staphylococcus aureus |
| Experiment type |
Expression profiling by genome tiling array
|
| Summary |
This analysis is part of the study Whole-transcriptome analysis of Staphylococcus aureus under laboratory and infection-mimicking conditions (Mäder, Nicolas et al., to be submitted) where the S. aureus HG001 transcriptome was analyzed under more than 40 different
biological conditions. The data revealed a relatively low abundance of antisense RNAs in S. aureus, overlapping only 6% of the coding genes. Transcriptome analysis of the rho deletion mutant revealed a remarkable overall increase in antisense transcription in S. aureus.
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| |
|
| Overall design |
delta rho and wild type
|
| |
|
| Contributor(s) |
Mäder U, Nicolas P, Debarbouille M, Guérin C, Hiron A, van der Kooi-Pol M, Schaffer M |
| Citation(s) |
27035918 |
| |
| Submission date |
Jun 19, 2015 |
| Last update date |
Jun 07, 2016 |
| Contact name |
Pierre Nicolas |
| E-mail(s) |
pierre.nicolas@inrae.fr
|
| Phone |
+33-1-3465-2894
|
| Organization name |
INRAE - Université Paris-Saclay
|
| Lab |
MaIAGE
|
| Street address |
INRAE - Domaine de Vilvert
|
| City |
Jouy-en-Josas |
| ZIP/Postal code |
F-78350 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL20587 |
BaSysBio Staphylococcus aureus T1 385K array 110831_SA_JH_Tiling |
|
| Samples (16)
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| This SubSeries is part of SuperSeries: |
|
| Relations |
| BioProject |
PRJNA287530 |
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