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| Status |
Public on Dec 31, 2015 |
| Title |
Expression profile of HCT116 cells treated with TNF-α/IFN-ɣ, both TNF-α/IFN-ɣ and silibinin, and without treatment. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Expression profiling of HCT116 colon cancer cells with different treatments. Illumina HumanHT-12 V4.0 expression beadchip was used to obtain expression profiles across more than 31,000 annotated genes.
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| |
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| Overall design |
Total RNA obtained from HCT116 cells with different treatments, namely, cells with TNF-α (50ng/ml)/IFN-ɣ (50U/ml) treatment, cells with TNF-α (50 ng/ml)/IFN-ɣ (50 U/ml) and silibinin (100 uM) treatment and cells without any treatment. Each sample has 2 biological replicates.
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| |
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| Contributor(s) |
GAO Y, MAH W, THENG SS, Lee CG |
| Citation(s) |
26142316 |
| Submission date |
Dec 12, 2014 |
| Last update date |
Aug 23, 2016 |
| Contact name |
Lee Guat Lay Caroline |
| E-mail(s) |
caroline_lee@nuhs.edu.sg
|
| Organization name |
National Cancer Centre Singapore
|
| Department |
Department of Biochemistry, National University of Singapore
|
| Lab |
Liver Cancer Functional Genomics Lab
|
| Street address |
11 Hospital Drive
|
| City |
Singapore |
| ZIP/Postal code |
169610 |
| Country |
Singapore |
| |
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| Platforms (1) |
| GPL10904 |
Illumina HumanHT-12 V4.0 expression beadchip (gene symbol) |
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| Samples (6)
|
| GSM1564975 |
RNA from HCT116 cells rep1 |
| GSM1564976 |
RNA from HCT116 cells treated with TNF-α/IFN-ɣ rep1 |
| GSM1564977 |
RNA from HCT116 cells treated with TNF-α/IFN-ɣ and silibinin rep1 |
| GSM1564978 |
RNA from HCT116 cells rep2 |
| GSM1564979 |
RNA from HCT116 cells treated with TNF-α/IFN-ɣ rep2 |
| GSM1564980 |
RNA from HCT116 cells treated with TNF-α/IFN-ɣ and silibinin rep2 |
|
| Relations |
| BioProject |
PRJNA270234 |
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