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Series GSE60337 Query DataSets for GSE60337
Status Public on Dec 31, 2014
Title Gene expression data for 39 inbred mice strains for CD4+ T cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Genome-wide expression data were generated for CD3+CD4+CD62L+ naïve T splenocytes across 39 strains in the MPD “Priority Strain Panel”.
 
Overall design Inbred mouse strains from the MDP Priority Strain Panel, representing 39 strains, were obtained from the Jackson Laboratory production facility in Bar Harbor, Maine, at five weeks of age. All mice were bred in the Jackson Laboratory production facility under SPF conditions. CD3+CD4+CD62L+ naïve T splenocytes were sorted from pools of two to three mice. Two biological replicates were generated for each strain using the ImmGen standard operating protocol (SOP; www.immgen.org). Gene expression data was generated for bone marrow granulocytes (GN) using Affymetrix ST1.0 microarrays resulting in the quantification of expression levels for 25,134 probes corresponding to 21,951 unique genes.
 
Contributor(s) Mostafavi S, Ortiz-Lopez A, Mathis D, Benoist C
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Submission date Aug 12, 2014
Last update date Mar 04, 2019
Contact name Liang Yang
Organization name Harvard Medical School
Department Pathology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (82)
GSM1472000 T4.129#1
GSM1472001 T4.129#2
GSM1472002 T4.AJ#1
This SubSeries is part of SuperSeries:
GSE60338 Gene expression data for 39 inbred mice strains for neutrophils and CD4+ T cells
Relations
BioProject PRJNA258056

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60337_RAW.tar 338.9 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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