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Series GSE43268 Query DataSets for GSE43268
Status Public on Nov 04, 2013
Title 48 apple trees from a segregating F1 population from a cross of 'Ottawa 3' x 'Robusta 5'
Organism Malus domestica
Experiment type Expression profiling by array
Summary 48 apple trees from a segregating F1 population from a cross of 'Ottawa 3' x 'Robusta 5' were analyzed by microarray to identify gene expression differences between the individuals to correlate gene expression patterns with phenotypic traits segregating in the population
 
Overall design 48 individual apple trees were assayed once each using RNA isolated from a single shoot tip from each tree. There were no biological or technical replicates in the experiment. There was no control sample, since all 48 were compared to each other.
 
Contributor(s) McNellis TW, Jensen PJ, Fazio G, Praul C
Citation(s) 22229964
Submission date Jan 03, 2013
Last update date Nov 06, 2013
Contact name Timothy McNellis
Organization name The Pennsylvania State University
Department Plant Pathology and Environmental Microbiology
Street address 318 Buckhout Lab
City University Park
State/province PA
ZIP/Postal code 16802
Country USA
 
Platforms (1)
GPL16447 NimbleGen Second Generation Apple 26K Array
Samples (48)
GSM1059706 Shoot Tip Untreated 1 13
GSM1059707 Shoot Tip Untreated 1 16
GSM1059708 Shoot Tip Untreated 1 18
Relations
BioProject PRJNA185338

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43268_RAW.tar 114.2 Mb (http)(custom) TAR (of PAIR)
Processed data included within Sample table

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