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Series GSE38495 Query DataSets for GSE38495
Status Public on Jul 22, 2012
Title Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We assessed Smart-Seq, a new single-cell RNA-Seq library preparation method, on a variety of mouse and human RNA samples or cells.
Overall design We generated RNA-Seq libraries for dilution series of MAQC reference RNA and mouse brain RNA to assess technical reproducibility, and for a variety of individual cells including putative circulating tumour cells.
Contributor(s) Luo S, Ramsköld D, Wang YC, Laurent LC, Sandberg R, Schroth GP
Citation(s) 22820318
Submission date Jun 05, 2012
Last update date May 15, 2019
Contact name Daniel Ramsköld
Organization name Karolinska Institutet
Lab Rickard Sandberg's group ( (2008-2014, 2018-); Rheumatology unit (2014-2018)
Street address Nobels väg 3
City Stockholm
ZIP/Postal code 17177
Country Sweden
Platforms (4)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (121)
GSM967457 Mouse brain 62HWT-10ng-12-s_1
GSM967458 Mouse brain 62HWT-10ng-12-s_2
GSM967459 Mouse brain 62HYJ-0.1x1ng-15-s_7
BioProject PRJNA170814
SRA SRP014428

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38495_RAW.tar 38.0 Gb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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