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Series GSE258295

Query DataSets for GSE258295

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR924PXF)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR924PXF/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 25, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21306

Illumina HiSeq 4000 (Drosophila melanogaster)

Samples (2)

GSM8109520	TF ChIP-seq from whole organism (ENCLB363GIU)
GSM8109522	TF ChIP-seq from whole organism (ENCLB156YIO)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258295_ENCFF026TXL_optimal_IDR_thresholded_peaks_dm6.bigBed	128.5 Kb	(ftp)(http)	BIGBED
GSE258295_ENCFF054IPC_signal_of_unique_reads_dm6.bigWig	17.1 Mb	(ftp)(http)	BIGWIG
GSE258295_ENCFF065CAR_peaks_dm6.bed.gz	760.9 Kb	(ftp)(http)	BED
GSE258295_ENCFF277VMU_control_normalized_signal_dm6.bigWig	13.3 Mb	(ftp)(http)	BIGWIG
GSE258295_ENCFF322AHC_optimal_IDR_thresholded_peaks_dm6.bed.gz	46.0 Kb	(ftp)(http)	BED
GSE258295_ENCFF515TKW_read-depth_normalized_signal_dm6.bigWig	17.0 Mb	(ftp)(http)	BIGWIG
GSE258295_ENCFF953BQN_peaks_dm6.bigBed	1.3 Mb	(ftp)(http)	BIGBED
GSE258295_RAW.tar	98.3 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA