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Series GSE257411 Query DataSets for GSE257411
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR354KRW)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing CG14965-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR354KRW/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 25, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (2)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (2)
GSM8107635 TF ChIP-seq from whole organism (ENCLB325SZC)
GSM8107636 TF ChIP-seq from whole organism (ENCLB851HPN)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257411_ENCFF002IGS_optimal_IDR_thresholded_peaks_dm3.bigBed 97.6 Kb (ftp)(http) BIGBED
GSE257411_ENCFF029RFF_signal_of_unique_reads_dm6.bigWig 16.7 Mb (ftp)(http) BIGWIG
GSE257411_ENCFF097MNO_peaks_and_background_as_input_for_IDR_dm3.bed.gz 639.0 Kb (ftp)(http) BED
GSE257411_ENCFF182IJU_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.1 Mb (ftp)(http) BIGBED
GSE257411_ENCFF196WBH_optimal_IDR_thresholded_peaks_dm6.bigBed 97.7 Kb (ftp)(http) BIGBED
GSE257411_ENCFF406KZU_signal_of_unique_reads_dm3.bigWig 14.7 Mb (ftp)(http) BIGWIG
GSE257411_ENCFF455OUZ_control_normalized_signal_dm6.bigWig 16.5 Mb (ftp)(http) BIGWIG
GSE257411_ENCFF536IBZ_control_normalized_signal_dm3.bigWig 15.2 Mb (ftp)(http) BIGWIG
GSE257411_ENCFF631KNA_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.3 Mb (ftp)(http) BIGBED
GSE257411_ENCFF650PLK_read-depth_normalized_signal_dm3.bigWig 14.7 Mb (ftp)(http) BIGWIG
GSE257411_ENCFF660LLE_peaks_and_background_as_input_for_IDR_dm6.bed.gz 766.1 Kb (ftp)(http) BED
GSE257411_ENCFF736BHD_optimal_IDR_thresholded_peaks_dm6.bed.gz 26.2 Kb (ftp)(http) BED
GSE257411_ENCFF987ITY_optimal_IDR_thresholded_peaks_dm3.bed.gz 26.4 Kb (ftp)(http) BED
GSE257411_ENCFF994UHD_read-depth_normalized_signal_dm6.bigWig 16.7 Mb (ftp)(http) BIGWIG
GSE257411_RAW.tar 196.0 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA
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