|
| Status |
Public on Feb 25, 2024 |
| Title |
Functional characterization of genetic variants associated with upper digestive cancers [ChIP-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Using H3K27ac ChIP-seq assays followed by sequencing to identify regulatory elements in upper digestive cancers
|
| |
|
| Overall design |
H3K27ac ChIP-seq was done to mark enhancer and promoter elements in de-identified primary tumors of gastric cancer and the adjacent normal tissues.
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| |
|
| Contributor(s) |
Bailey SD, Zhang X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 07, 2023 |
| Last update date |
Feb 26, 2024 |
| Contact name |
Xiaoyang Zhang |
| Organization name |
University of Utah
|
| Lab |
Zhang lab
|
| Street address |
1950 CIrcle of Hope
|
| City |
Salt Lake City |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (4)
|
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| This SubSeries is part of SuperSeries: |
| GSE240214 |
Functional characterization of genetic variants associated with upper digestive cancers |
|
| Relations |
| BioProject |
PRJNA1002983 |
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