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| Status |
Public on Aug 24, 2023 |
| Title |
Long- and short-read RNA sequencing from five reproductive organs of boar. |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
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| Summary |
PacBio SMRTseq long reads and Illumina short reads of pig testis, epididymis, vesicular gland, prostate gland, and bulbourethral gland
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| Overall design |
Use PacBio IsoSeq to sequence pig testis, epididymis, vesicular gland, prostate gland, and bulbourethral gland RNAs
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| Contributor(s) |
Huo J, Sun YH, Liu Z, Zhang X |
| Citation(s) |
37798273, 38927591 |
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| Submission date |
Apr 25, 2023 |
| Last update date |
Jul 31, 2024 |
| Contact name |
Huo Jinlong |
| E-mail(s) |
jinlonghuo973@gmail.com
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| Organization name |
Yunnan Agricultural University
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| Street address |
Jinhei Road 95
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| City |
Yunnan Kunming |
| ZIP/Postal code |
650201 |
| Country |
China |
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| Platforms (3) |
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| Samples (70)
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| Relations |
| BioProject |
PRJNA961656 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE230506_RNAseq_expression.tpm.txt.gz |
9.0 Mb |
(ftp)(http) |
TXT |
| GSE230506_Summary_PacBio.txt.gz |
11.7 Mb |
(ftp)(http) |
TXT |
| GSE230506_TranscriptomeAssembly.PacBio.gtf.gz |
17.2 Mb |
(ftp)(http) |
GTF |
| GSE230506_Transcriptome_sequences_PacBio.fa.gz |
35.4 Mb |
(ftp)(http) |
FA |
| GSE230506_miRNAseq_expression.rpm.txt.gz |
38.7 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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