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Series GSE199208 Query DataSets for GSE199208
Status Public on Feb 08, 2023
Title Single-cell and Bulk Transcriptomics of the Human Submandibular Gland Reveals Conserved Factors and Pathways [Bulk RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed bulk RNA-sequencing analysis of human submandibular gland samples and then compared to expression of multiple human tissues in order to identify a salivary gland gene signature.
 
Overall design Bulk RNA-sequencing was performed on 15 human submandibular gland samples. DEG analyses were performed in order to identify genes enriched in the SMG.
 
Contributor(s) Horeth E, Sinha S, Romano R
Citation(s) 36726292
Submission date Mar 23, 2022
Last update date Apr 05, 2024
Contact name Rose-Anne Romano
E-mail(s) rromano2@buffalo.edu
Organization name SUNY University at Buffalo
Street address Main Cir
City Buffalo
State/province NY
ZIP/Postal code 14215
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (15)
GSM5966687 Submandibular Gland 01 bulk
GSM5966688 Submandibular Gland 02 bulk
GSM5966689 Submandibular Gland 03 bulk
This SubSeries is part of SuperSeries:
GSE199209 Single-cell and Bulk Transcriptomics of the Human Submandibular Gland Reveals Conserved Factors and Pathways
Relations
BioProject PRJNA818895

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199208_DESeq2_normalizedCounts.csv.gz 16.7 Mb (ftp)(http) CSV
GSE199208_RAW.tar 38.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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