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Series GSE193011 Query DataSets for GSE193011
Status Public on Oct 15, 2022
Title Transcriptional responses of CDCA treated Staphylococcus aureus cells
Organism Staphylococcus aureus
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of Staphylococcus aureus treated by CDCA. Staphylococcus aureus cells are evaluated with RNA-seq to understand the genes affected by this antibacterial agent. Our results provide new vision on the mode of action by CDCA.
 
Overall design We used three Staphylococcus aureus replicates and three CDCA-treated Staphylococcus aureus replicates to compare the differential gene expression.
 
Contributor(s) Wei Q, Wang Y
Citation(s) 36625660
Submission date Jan 04, 2022
Last update date Jun 02, 2023
Contact name Qing Wei
E-mail(s) vubwqing@hotmail.com
Organization name Institute of Microbiology, Chinese Academy of Sciences
Lab Biofilm Research Group
Street address NO.1 Beichen West Road, Chaoyang District
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL27158 Illumina NovaSeq 6000 (Staphylococcus aureus)
Samples (6)
GSM5770649 Control_1, biological replicate1
GSM5770650 Control_2, biological replicate2
GSM5770651 Control_3, biological replicate3
Relations
BioProject PRJNA794125

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193011_CvsControl_deg.txt.gz 261.2 Kb (ftp)(http) TXT
GSE193011_CvsControl_deg_all.txt.gz 46.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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