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Series GSE181099 Query DataSets for GSE181099
Status Public on Jul 29, 2024
Title Small RNA next generation sequencing of miRNAs in MCF7 cells derived mammosphere treated with withaferin A
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary In this study, we reporte the altered miRNAs expression in the human breast cancer cell line (MCF7) derived mammosphere in response to withaferin A IC50 concentrations (2 µM)..
 
Overall design Withaferin A is a major pharmacological active constituent of Withania somnifera (Solanaceae). In this study we were aimed to identify the diffentially expressed known/novel miRNAs using next generation sequencing (NGS) in withaferin A treated MCF7 derived mammosphere. For this, MCF7 cells were initially treated with withaferin A with 2 µM concentration (experimental groups) and without treated MCF7 cells (the control group) were allowed to form spheres and incubated at 37 ºC under a 95% humid environment in an incubator having 5% CO2 for five days. Three samples were assigned for each group.
 
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Submission date Jul 29, 2021
Last update date Jul 29, 2024
Contact name Shashank Kumar
E-mail(s) shashankbiochemau@gmail.com
Organization name CENTRAL UNIVERSITY OF PUNJAB
Department Biochemistry
Lab Molecular Signaling & Drug Discovery Laboratory
Street address VPO Guddha
City Bathinda
State/province Punjab
ZIP/Postal code 151401
Country India
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (6)
GSM5484540 MCF7-MS-repl1
GSM5484541 MCF7-MS-repl2
GSM5484542 MCF7-MS-repl3
Relations
BioProject PRJNA750717
SRA SRP330431

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
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Supplementary file Size Download File type/resource
GSE181099_01_Expression_Counts_MCF7_Mammosphere_Groups.xlsx 46.7 Kb (ftp)(http) XLSX
GSE181099_02_Normalized_Expression_Counts_MCF7_Mammosphere_Groups.xlsx 45.7 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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