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Series GSE169430 Query DataSets for GSE169430
Status Public on Apr 01, 2024
Title Transcriptional Activation of Regenerative Haematopoiesis via Niche Sensing [Bulk H3K27ac ChIP]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K27ac ChIP-seq analysis for WT and Fli-1 KO HSPCs was performed to uncover changes in chromatin H3K27ac modifications following Fli-1 deletion.
 
Overall design H3K27ac ChIP sequencing of WT and Fli-1 KO HSPCs after 6d in co-culture with a vascular niche post Fli-1 deletion induction.
 
Contributor(s) Itkin T, Houghton S, Rafii S
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Submission date Mar 23, 2021
Last update date Apr 01, 2024
Contact name Tomer Itkin
E-mail(s) toi2003@med.cornell.edu
Organization name Weill Cornell Medicine
Department Medicine
Lab Rafii
Street address 1300 York Avenue, A-869
City NY
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (10)
GSM5203006 KO LSK 1 [ChIP]
GSM5203007 KO LSK 2 [ChIP]
GSM5203008 KO LSK 3 [ChIP]
This SubSeries is part of SuperSeries:
GSE169431 Transcriptional Activation of Regenerative Haematopoiesis via Niche Sensing
Relations
BioProject PRJNA716603
SRA SRP311813

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE169430_RAW.tar 2.0 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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