|
| Status |
Public on Aug 20, 2018 |
| Title |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31133762, 30096152 |
| |
| Submission date |
Aug 20, 2018 |
| Last update date |
Nov 29, 2021 |
| Contact name |
Shian Su |
| E-mail(s) |
su.s@wehi.edu.au
|
| Organization name |
Walter and Eliza Hall Institute of Medical Research
|
| Department |
Molecular Medicine
|
| Lab |
Ritchie Lab
|
| Street address |
1G Royal Parade
|
| City |
Melbourne |
| State/province |
Victoria |
| ZIP/Postal code |
3052 |
| Country |
Australia |
| |
|
| Platforms (2) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (13)
|
| GSM3295023 |
CellPOP_sample_O1 to CellPOP_sample_O24 |
| GSM3295024 |
Cellmix1_sample_A3 to Cellmix1_sample_P20 SC1 |
| GSM3295025 |
Cellmix2_sample_A3 to Cellmix2_sample_P20 SC2 |
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE111108 |
Single cell profiling of 3 Human Lung Adenocarcinoma cell lines. |
| GSE117450 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (9 cell mixture dataset). |
| GSE117617 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (RNAmix_CEL-seq2 ) |
| GSE117618 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (RNAmix_Sort-seq) |
| GSE118704 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (Cel_Seq) |
| GSE118706 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (Drop-Seq) |
| GSE126906 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods [5 Cell Lines 10X] |
| GSE126908 |
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods [5 Cell Lines Cel-seq] |
|
| Relations |
| BioProject |
PRJNA486769 |
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