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Series GSE105397 Query DataSets for GSE105397
Status Public on Oct 20, 2017
Title ChIP-seq from HepG2 (ENCSR258SXK)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary SFPQ ChIP-seq in HepG2

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR258SXK/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Oct 20, 2017
Last update date Jul 25, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2825596 ChIP-seq from HepG2 (ENCLB764ORA)
GSM2825597 ChIP-seq from HepG2 (ENCLB306RKG)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105397_ENCFF023UED_optimal_idr_thresholded_peaks_GRCh38.bigBed 90.3 Kb (ftp)(http) BIGBED
GSE105397_ENCFF247JFQ_signal_p-value_hg19.bigWig 752.1 Mb (ftp)(http) BIGWIG
GSE105397_ENCFF290GLV_conservative_idr_thresholded_peaks_GRCh38.bigBed 95.3 Kb (ftp)(http) BIGBED
GSE105397_ENCFF357IUK_peaks_hg19.bed.gz 6.0 Mb (ftp)(http) BED
GSE105397_ENCFF376UPU_signal_p-value_GRCh38.bigWig 757.2 Mb (ftp)(http) BIGWIG
GSE105397_ENCFF399SZP_peaks_GRCh38.bigBed 12.8 Mb (ftp)(http) BIGBED
GSE105397_ENCFF422DEL_peaks_hg19.bigBed 12.8 Mb (ftp)(http) BIGBED
GSE105397_ENCFF487UBR_fold_change_over_control_GRCh38.bigWig 769.5 Mb (ftp)(http) BIGWIG
GSE105397_ENCFF491IMR_conservative_idr_thresholded_peaks_GRCh38.bed.gz 7.0 Kb (ftp)(http) BED
GSE105397_ENCFF656QSA_fold_change_over_control_hg19.bigWig 735.4 Mb (ftp)(http) BIGWIG
GSE105397_ENCFF664WJC_optimal_idr_thresholded_peaks_hg19.bigBed 93.1 Kb (ftp)(http) BIGBED
GSE105397_ENCFF671QBO_optimal_idr_thresholded_peaks_GRCh38.bed.gz 8.3 Kb (ftp)(http) BED
GSE105397_ENCFF692DSK_conservative_idr_thresholded_peaks_hg19.bed.gz 6.8 Kb (ftp)(http) BED
GSE105397_ENCFF881XJE_conservative_idr_thresholded_peaks_hg19.bigBed 94.2 Kb (ftp)(http) BIGBED
GSE105397_ENCFF922FRH_optimal_idr_thresholded_peaks_hg19.bed.gz 9.7 Kb (ftp)(http) BED
GSE105397_ENCFF975QZC_peaks_GRCh38.bed.gz 5.9 Mb (ftp)(http) BED
GSE105397_RAW.tar 3.0 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record

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