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Series GSE105183

Query DataSets for GSE105183

Status

Public on Oct 20, 2017

Title

ChIP-seq from HEK293 (ENCSR004PLU)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

eGFP-ZBTB10 ChIP-seq on human HEK293 cells.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR004PLU/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Oct 19, 2017

Last update date

Jul 25, 2021

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM2824336	ChIP-seq from HEK293 (ENCLB227MHI)
GSM2824337	ChIP-seq from HEK293 (ENCLB231NSS)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE105183_ENCFF052UBY_signal_p-value_GRCh38.bigWig	1.8 Gb	(ftp)(http)	BIGWIG
GSE105183_ENCFF186CFI_conservative_idr_thresholded_peaks_hg19.bigBed	695.3 Kb	(ftp)(http)	BIGBED
GSE105183_ENCFF357ZIA_conservative_idr_thresholded_peaks_hg19.bed.gz	281.1 Kb	(ftp)(http)	BED
GSE105183_ENCFF432HNP_fold_change_over_control_GRCh38.bigWig	1.9 Gb	(ftp)(http)	BIGWIG
GSE105183_ENCFF511BOQ_optimal_idr_thresholded_peaks_GRCh38.bed.gz	327.5 Kb	(ftp)(http)	BED
GSE105183_ENCFF553XZX_peaks_GRCh38.bigBed	12.5 Mb	(ftp)(http)	BIGBED
GSE105183_ENCFF587TFO_signal_p-value_hg19.bigWig	1.8 Gb	(ftp)(http)	BIGWIG
GSE105183_ENCFF654AER_conservative_idr_thresholded_peaks_GRCh38.bed.gz	276.2 Kb	(ftp)(http)	BED
GSE105183_ENCFF675RNJ_optimal_idr_thresholded_peaks_hg19.bed.gz	327.4 Kb	(ftp)(http)	BED
GSE105183_ENCFF787IBR_peaks_hg19.bigBed	12.5 Mb	(ftp)(http)	BIGBED
GSE105183_ENCFF855RLL_conservative_idr_thresholded_peaks_GRCh38.bigBed	687.9 Kb	(ftp)(http)	BIGBED
GSE105183_ENCFF856ZVM_peaks_GRCh38.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE105183_ENCFF902KSI_peaks_hg19.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE105183_ENCFF937UCQ_optimal_idr_thresholded_peaks_hg19.bigBed	785.4 Kb	(ftp)(http)	BIGBED
GSE105183_ENCFF959WUN_fold_change_over_control_hg19.bigWig	1.9 Gb	(ftp)(http)	BIGWIG
GSE105183_ENCFF980QWS_optimal_idr_thresholded_peaks_GRCh38.bigBed	789.0 Kb	(ftp)(http)	BIGBED
GSE105183_RAW.tar	10.9 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record