U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100123031 TOM1-like protein 2 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100123031, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100123031
    Gene description
    TOM1-like protein 2
    See related
    NASONIABASE:NV12020
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100123031 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (7080045..7086858, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279627.1 (6050537..6057237)

    Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene MAPK regulated corepressor interacting protein 2 Neighboring gene solute carrier family 25 member 44 Neighboring gene dynein regulatory complex subunit 3 Neighboring gene enoyl-CoA delta isomerase 1, mitochondrial Neighboring gene uncharacterized LOC103317421 Neighboring gene cyclin-K-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    TOM1-like protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045759.1 Reference Nvit_psr_1.1

      Range
      7080045..7086858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001606587.6 → XP_001606637.2  TOM1-like protein 2

      See identical proteins and their annotated locations for XP_001606637.2

      UniProtKB/TrEMBL
      A0A7M7G7Z7
      Conserved Domains (2) summary
      cd14233
      Location:235 → 328
      GAT_TOM1_like; GAT domain found in target of myb protein 1 (Tom1) protein family
      cl02544
      Location:15 → 156
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials