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    PTPMT1 protein tyrosine phosphatase, mitochondrial 1 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100123333, updated on 10-Oct-2024

    Summary

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    Gene symbol
    PTPMT1
    Gene description
    protein tyrosine phosphatase, mitochondrial 1
    See related
    NASONIABASE:NV11556
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See PTPMT1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 4 Unlocalized Scaffold NC_045760.1 (402990..407634)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 4 Unlocalized Scaffold NW_022279642.1 (404096..407630)

    Chromosome 4 - NC_045760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107981060 Neighboring gene protein phosphatase 1B Neighboring gene uncharacterized LOC116417142 Neighboring gene caspase-like Neighboring gene serine/threonine-protein kinase MARK2-like Neighboring gene Tryptophanyl-tRNA synthetase Neighboring gene alanine--tRNA ligase, mitochondrial Neighboring gene autophagy related protein 14 Neighboring gene kelch-like protein 17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylglycerophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045760.1 Reference Nvit_psr_1.1

      Range
      402990..407634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001606909.6 → XP_001606959.2  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

      UniProtKB/TrEMBL
      A0A7M7QDL3
      Conserved Domains (1) summary
      cd14524
      Location:33 → 188
      PTPMT1; protein-tyrosine phosphatase mitochondrial 1

    2. XM_031928615.1 → XP_031784475.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

      UniProtKB/TrEMBL
      A0A7M7QDL3
      Conserved Domains (1) summary
      cd14524
      Location:33 → 188
      PTPMT1; protein-tyrosine phosphatase mitochondrial 1
    Nucleotide Protein Strain
    Heading Accession and Version

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