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    LOC100007972 uncharacterized LOC100007972 [ Danio rerio (zebrafish) ]

    Gene ID: 100007972, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC100007972
    Gene description
    uncharacterized LOC100007972
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:173705
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (51865352..51876416)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (49935150..49945903)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100535857 Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA serine (anticodon GCU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    gastrula zinc finger protein xLCGF3.1; uncharacterized protein LOC100007972

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      51865352..51876416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017355677.2 → XP_017211166.1  gastrula zinc finger protein xLCGF3.1

      UniProtKB/TrEMBL
      A0A8M6Z5X4

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001111253.1: Suppressed sequence

      Description
      NM_001111253.1: This RefSeq was removed because this transcript aligns to a different region of the genome.
    Nucleotide Protein
    Heading Accession and Version

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