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    dhx57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [ Kryptolebias marmoratus (mangrove rivulus) ]

    Gene ID: 108241011, updated on 10-Apr-2024

    Summary

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    Gene symbol
    dhx57
    Gene description
    DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
    See related
    EnsemblRapid:ENSKMAG00010019394
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Kryptolebias marmoratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: LG18
    Exon count:
    25
    Annotation release Status Assembly LG Location
    102 current ASM164957v2 (GCF_001649575.2) LG18 NC_051447.1 (15846256..15857699, complement)
    101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094320.1 (1294021..1305455, complement)

    Linkage Group LG18 - NC_051447.1Genomic Context describing neighboring genes Neighboring gene small lysine-rich protein 1 Neighboring gene short transmembrane mitochondrial protein 1 Neighboring gene MORN repeat containing 2 Neighboring gene striatin interacting protein 2 Neighboring gene adenosylhomocysteinase like 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative ATP-dependent RNA helicase DHX57
    Names
    DEAH-box helicase 57
    DExH-box helicase 57

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM164957v2 Primary Assembly

    Genomic

    1. NC_051447.1 Reference ASM164957v2 Primary Assembly

      Range
      15846256..15857699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017424894.3 → XP_017280383.1  putative ATP-dependent RNA helicase DHX57

      UniProtKB/TrEMBL
      A0A3Q3BH54, A0A3Q3BHX5
      Related
      ENSKMAP00010041983.1, ENSKMAT00010044366.1
      Conserved Domains (4) summary
      COG1643
      Location:546 → 1412
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      cd14317
      Location:202 → 239
      UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
      pfam00642
      Location:325 → 345
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam05773
      Location:268 → 442
      RWD; RWD domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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