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    mto1 mitochondrial tRNA translation optimization 1 [ Esox lucius (northern pike) ]

    Gene ID: 105024380, updated on 18-Jun-2024

    Summary

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    Gene symbol
    mto1
    Gene description
    mitochondrial tRNA translation optimization 1
    See related
    Ensembl:ENSELUG00000022936
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Esox lucius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
    Orthologs
    human zebrafish all
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    Genomic context

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    See mto1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current fEsoLuc1.pri (GCF_011004845.1) 5 NC_047573.1 (33189691..33207444, complement)
    103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG05 NC_025972.4 (33385968..33402053, complement)

    Chromosome 5 - NC_047573.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor TFIID subunit 5 Neighboring gene sulfotransferase family cytosolic 1B member 1 Neighboring gene tectonic-3 Neighboring gene ataxin-2-like protein Neighboring gene ADP-ribosylarginine hydrolase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MTO1 homolog, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEsoLuc1.pri Primary Assembly

    Genomic

    1. NC_047573.1 Reference fEsoLuc1.pri Primary Assembly

      Range
      33189691..33207444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010894307.3 → XP_010892609.1  protein MTO1 homolog, mitochondrial

      UniProtKB/TrEMBL
      A0A3P8Z5S1
      Related
      ENSELUP00000024144.2, ENSELUT00000043001.3
      Conserved Domains (3) summary
      PRK05192
      Location:29 → 663
      PRK05192; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
      pfam13932
      Location:438 → 647
      GIDA_assoc; GidA associated domain
      cl21454
      Location:354 → 423
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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