U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LINC00430 long intergenic non-protein coding RNA 430 [ Homo sapiens (human) ]

    Gene ID: 106144533, updated on 10-Oct-2023

    Summary

    Official Symbol
    LINC00430provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 430provided by HGNC
    Primary source
    HGNC:HGNC:42765
    See related
    AllianceGenome:HGNC:42765
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    13q31.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (86909601..86936807)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (86112825..86140031)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (87561856..87589062)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene thioredoxin like 1 pseudogene 1 Neighboring gene uncharacterized LOC105370300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87492703-87493204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87493205-87493704 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87533403-87534006 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534007-87534608 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534609-87535210 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:87535211-87535812 Neighboring gene uncharacterized LOC105370301 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:87694909-87696108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87732807-87733306 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:87776108-87776695 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:87780120-87780803 Neighboring gene NANOG hESC enhancer GRCh37_chr13:87783776-87784327 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87838612-87839124 Neighboring gene ubiquitin B pseudogene 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_132371.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL356096, AW661815

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      86909601..86936807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      86112825..86140031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)