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    Abcd2 ATP binding cassette subfamily D member 2 [ Chinchilla lanigera (long-tailed chinchilla) ]

    Gene ID: 102028992, updated on 11-Apr-2024

    Summary

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    Gene symbol
    Abcd2
    Gene description
    ATP binding cassette subfamily D member 2
    See related
    Ensembl:ENSCLAG00000000619
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chinchilla lanigera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955505.1 (717800..769702)

    NW_004955505.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat kinase 2 Neighboring gene solute carrier family 2 member 13 Neighboring gene E3 ubiquitin-protein ligase RING2 pseudogene Neighboring gene regulator of DNA class I crossover intermediates 1 Neighboring gene L-lactate dehydrogenase A chain pseudogene Neighboring gene kinesin family member 21A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004955505.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables long-chain fatty acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-chain fatty acid import into peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family D member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ChiLan1.0 Primary Assembly

    Genomic

    1. NW_004955505.1 Reference ChiLan1.0 Primary Assembly

      Range
      717800..769702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005407101.2 → XP_005407158.1  ATP-binding cassette sub-family D member 2

      UniProtKB/TrEMBL
      A0A8C2YIC1
      Related
      ENSCLAP00000000789.1, ENSCLAT00000000826.1
      Conserved Domains (3) summary
      cd03223
      Location:479 → 684
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      TIGR00954
      Location:73 → 686
      3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
      pfam06472
      Location:79 → 364
      ABC_membrane_2; ABC transporter transmembrane region 2
    Nucleotide Protein
    Heading Accession and Version

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