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    LOC11439987 ethylene-responsive transcription factor ERF061 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11439987, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11439987
    Gene description
    ethylene-responsive transcription factor ERF061
    Locus tag
    MtrunA17_Chr5g0396741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 5 NC_053046.1 (2259259..2260658)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 5 NC_016411.2 (2245180..2246644)

    Chromosome 5 - NC_053046.1Genomic Context describing neighboring genes Neighboring gene long chain acyl-CoA synthetase 4 Neighboring gene long chain acyl-CoA synthetase 4 Neighboring gene probable protein phosphatase 2C 8 Neighboring gene exosome complex component RRP40 Neighboring gene transcription factor TRY

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor ERF061
    Names
    AP2 domain class transcription factor
    putative transcription factor AP2-EREBP family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053046.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      2259259..2260658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003610956.4 → XP_003611004.1  ethylene-responsive transcription factor ERF061

      See identical proteins and their annotated locations for XP_003611004.1

      UniProtKB/TrEMBL
      G7KAL6, I3SC01
      Conserved Domains (1) summary
      smart00380
      Location:117 → 178
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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