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    LOC107456884 uncharacterized LOC107456884 [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107456884, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107456884
    Gene description
    uncharacterized LOC107456884
    See related
    EnsemblRapid:LOC107456884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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    Genomic context

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    See LOC107456884 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024969593.1 (869160..888131, complement)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015489242.1 (266351..281826)

    NW_024969593.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110282711 Neighboring gene adhesion G-protein coupled receptor V1 Neighboring gene phospholysine phosphohistidine inorganic pyrophosphate phosphatase Neighboring gene nucleolysin TIAR

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. Kono N, et al. Mol Ecol Resour, 2016 May. PMID 26561354
    2. Evolutionary origin of type IV classical cadherins in arthropods. Sasaki M, et al. BMC Evol Biol, 2017 Jun 17. PMID 28623893, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inorganic diphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC107456884
    Names
    phospholysine phosphohistidine inorganic pyrophosphate phosphatase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_3.0

    Genomic

    1. NW_024969593.1 Reference Ptep_3.0

      Range
      869160..888131 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043039577.1 → XP_042895511.1  uncharacterized protein LOC107456884

      Related
      XP_042895511.1, XM_043039577.1
      Conserved Domains (1) summary
      TIGR01458
      Location:266 → 518
      HAD-SF-IIA-hyp3; HAD-superfamily subfamily IIA hydrolase, TIGR01458

    2. XM_043039622.1 → XP_042895556.1  uncharacterized protein LOC107456884

      Related
      XP_042895556.1, XM_043039622.1
      Conserved Domains (1) summary
      TIGR01458
      Location:266 → 518
      HAD-SF-IIA-hyp3; HAD-superfamily subfamily IIA hydrolase, TIGR01458
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases