U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6607487 transmembrane protein 47 [ Drosophila sechellia ]

Gene ID: 6607487, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC6607487
Gene description
transmembrane protein 47
Locus tag
Dsec_GM26463
See related
EnsemblRapid:LOC6607487
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM26463; GM26464; GM26463-PA; GM26464-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6607487 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (21291041..21295332)

Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene Iron regulatory protein 1A Neighboring gene ring finger protein 220 Neighboring gene mitogen-activated protein kinase kinase kinase 7 Neighboring gene endoribonuclease Dcr-1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045952.1 Chromosome 3R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transmembrane protein 47
Names
Dsec\GM26463
Dsec\GM26463-PA
Dsec\GM26464
Dsec\GM26464-PA
dsec_GLEANR_9340
dsec_GLEANR_9341

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045952.1 Reference ASM438219v1

    Range
    21291041..21295332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032723043.1 → XP_032578934.1  transmembrane protein 47 isoform X2

    UniProtKB/TrEMBL
    B4HET1
    Related
    XP_032578934.1, XM_032723043.1
    Conserved Domains (1) summary
    cl21598
    Location:80 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_002032220.2 → XP_002032256.2  transmembrane protein 47 isoform X1

    Related
    XP_002032256.2, XM_002032220.2
    Conserved Domains (1) summary
    cl21598
    Location:151 → 250
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials