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    LOC6608143 protein deadpan [ Drosophila sechellia ]

    Gene ID: 6608143, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6608143
    Gene description
    protein deadpan
    Locus tag
    Dsec_GM20707
    See related
    EnsemblRapid:LOC6608143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM20707; GM20707-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6608143 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (4488706..4492062, complement)

    Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene LDL receptor protein 1 Neighboring gene protein nemuri Neighboring gene uncharacterized LOC6608141 Neighboring gene septin 7-like protein pnut Neighboring gene uncharacterized LOC116800568

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045950.1 Chromosome 2R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anterior/posterior pattern specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein deadpan
    Names
    Dsec\GM20707
    Dsec\GM20707-PA
    dsec_GLEANR_3520

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045950.1 Reference ASM438219v1

      Range
      4488706..4492062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002032853.2 → XP_002032889.1  protein deadpan

      See identical proteins and their annotated locations for XP_002032889.1

      UniProtKB/TrEMBL
      B4HRM0
      Related
      XP_002032889.1, XM_002032853.2
      Conserved Domains (2) summary
      smart00511
      Location:114 → 158
      ORANGE; Orange domain
      cd00083
      Location:39 → 101
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    Nucleotide Protein Strain
    Heading Accession and Version

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