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    LOC552238 cilia- and flagella-associated protein 52 [ Apis mellifera (honey bee) ]

    Gene ID: 552238, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC552238
    Gene description
    cilia- and flagella-associated protein 52
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB48911
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current Amel_HAv3.1 (GCF_003254395.2) Unplaced Scaffold NW_020555859.1 (410607..414481)
    103 previous assembly Amel_4.5 (GCF_000002195.4) Unplaced Scaffold NW_003378234.1 (104389..108714)

    NW_020555859.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102653788 Neighboring gene outer dense fiber protein 3-B Neighboring gene autophagy protein 12-like Neighboring gene 26S proteasome non-ATPase regulatory subunit 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 52

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NW_020555859.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      410607..414481
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026445973.1 → XP_026301758.1  cilia- and flagella-associated protein 52

      UniProtKB/TrEMBL
      A0A7M7MWA5, A0A8B8HDI8
      Conserved Domains (3) summary
      cd00200
      Location:335 → 626
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:346 → 383
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:5 → 456
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases