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    LOC410351 neurogenic locus protein delta [ Apis mellifera (honey bee) ]

    Gene ID: 410351, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC410351
    Gene description
    neurogenic locus protein delta
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB45005
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    Genomic context

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    Location:
    chromosome: LG11
    Exon count:
    7
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG11 NC_037648.1 (13330085..13375188, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG11 NC_007080.3 (11585118..11628968, complement)

    Linkage Group LG11 - NC_037648.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100578317 Neighboring gene uncharacterized LOC100578357 Neighboring gene uncharacterized LOC102653638 Neighboring gene uncharacterized LOC100578438 Neighboring gene uncharacterized LOC102653665

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurogenic locus protein delta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037648.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      13330085..13375188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006566412.3 → XP_006566475.1  neurogenic locus protein delta isoform X1

      UniProtKB/TrEMBL
      A0A7M7GUC8, A0A8B6Z2Q2
      Conserved Domains (3) summary
      cd00054
      Location:568 → 603
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam01414
      Location:162 → 224
      DSL; Delta serrate ligand
      pfam07657
      Location:24 → 95
      MNNL; N terminus of Notch ligand

    2. XM_016915193.2 → XP_016770682.1  neurogenic locus protein delta isoform X2

      UniProtKB/TrEMBL
      A0A7M7IHM6, A0A8B7KQD0
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials