U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC412350 histone deacetylase 3 [ Apis mellifera (honey bee) ]

    Gene ID: 412350, updated on 25-Jan-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC412350
    Gene description
    histone deacetylase 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    HD3; Hdac3; GB43894
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: LG8
    Exon count:
    1
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG8 NC_037645.1 (6575527..6577323, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG8 NC_007077.3 (6625129..6626928, complement)

    Linkage Group LG8 - NC_037645.1Genomic Context describing neighboring genes Neighboring gene cytospin-A Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC100578949 Neighboring gene uncharacterized LOC551338 Neighboring gene sex-lethal homolog Neighboring gene uncharacterized LOC107964814 Neighboring gene uncharacterized LOC107964813 Neighboring gene microRNA mir-980

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    histone deacetylase 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037645.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      6575527..6577323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_395811.6 → XP_395811.2  histone deacetylase 3

      UniProtKB/TrEMBL
      A0A7M7R5Y2, A0A8B9B5X5
      Conserved Domains (2) summary
      cd10005
      Location:5 → 385
      HDAC3; Histone deacetylase 3 (HDAC3)
      PTZ00063
      Location:2 → 401
      PTZ00063; histone deacetylase; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous