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    Mrpl53 mitochondrial ribosomal protein L53 [ Mus musculus (house mouse) ]

    Gene ID: 68499, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mrpl53provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L53provided by MGI
    Primary source
    MGI:MGI:1915749
    See related
    Ensembl:ENSMUSG00000030037
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110007K17Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 67.0), ovary adult (RPKM 44.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Mrpl53 in Genome Data Viewer
    Location:
    6; 6 C3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (83086089..83086913)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (83109108..83109932)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (83059102..83059926)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene ladybird homeobox 2 Neighboring gene microRNA 3470a Neighboring gene coiled-coil domain containing 142 Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene WW domain binding protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    39S ribosomal protein L53, mitochondrial
    Names
    L53mt
    MRP-L53

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026744.3NP_081020.1  39S ribosomal protein L53, mitochondrial

      See identical proteins and their annotated locations for NP_081020.1

      Status: PROVISIONAL

      Source sequence(s)
      AK003549
      Consensus CDS
      CCDS20272.1
      UniProtKB/Swiss-Prot
      Q9D1H8
      Related
      ENSMUSP00000109571.4, ENSMUST00000113938.5
      Conserved Domains (1) summary
      pfam10780
      Location:2071
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      83086089..83086913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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