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    Tm9sf2 transmembrane 9 superfamily member 2 [ Mus musculus (house mouse) ]

    Gene ID: 68059, updated on 9-Sep-2018

    Summary

    Official Symbol
    Tm9sf2provided by MGI
    Official Full Name
    transmembrane 9 superfamily member 2provided by MGI
    Primary source
    MGI:MGI:1915309
    See related
    Ensembl:ENSMUSG00000025544 Vega:OTTMUSG00000035868
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    P76; AA536814; D14Ertd64e; 1500001N15Rik
    Expression
    Ubiquitous expression in colon adult (RPKM 91.0), duodenum adult (RPKM 80.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Tm9sf2 in Genome Data Viewer
    Location:
    14 E5; 14 65.86 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (122107082..122159603)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (122506304..122558825)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 8A2 Neighboring gene RIKEN cDNA A330035P11 gene Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene citrate lyase beta like Neighboring gene RIKEN cDNA 1700108J01 gene Neighboring gene predicted gene 5089

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    protein localization to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    transmembrane 9 superfamily member 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080556.3NP_542123.3  transmembrane 9 superfamily member 2 precursor

      See identical proteins and their annotated locations for NP_542123.3

      Status: VALIDATED

      Source sequence(s)
      AK048012, AV028818, BB619330
      Consensus CDS
      CCDS27345.1
      UniProtKB/Swiss-Prot
      P58021
      UniProtKB/TrEMBL
      Q542E4
      Related
      ENSMUSP00000026624.4, OTTMUSP00000050709, ENSMUST00000026624.10, OTTMUST00000091945
      Conserved Domains (1) summary
      pfam02990
      Location:74618
      EMP70; Endomembrane protein 70

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      122107082..122159603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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