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    Elob elongin B [ Mus musculus (house mouse) ]

    Gene ID: 67673, updated on 8-Oct-2018

    Summary

    Official Symbol
    Elobprovided by MGI
    Official Full Name
    elongin Bprovided by MGI
    Primary source
    MGI:MGI:1914923
    See related
    Ensembl:ENSMUSG00000055839
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tceb2; 0610040H15Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 383.1), large intestine adult (RPKM 213.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Elob in Genome Data Viewer
    Location:
    17; 17 A3.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (23824740..23829109, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (23961707..23966076, complement)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene FLYWCH family member 2 Neighboring gene serine/arginine repetitive matrix 2 Neighboring gene microRNA 5125 Neighboring gene protease, serine 33 Neighboring gene protease, serine 41

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    transcription coactivator activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    positive regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    transcription elongation from RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    VCB complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    VCB complex ISO
    Inferred from Sequence Orthology
    more info
     
    elongin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    elongin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    transcription factor complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    elongin-B
    Names
    18 kDa, elongin B
    RNA polymerase II transcription factor SIII subunit B
    SIII p18
    elongin 18 kDa subunit
    transcription elongation factor B (SIII), polypeptide 2 (18 kDa, elongin B)
    transcription elongation factor B polypeptide 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026305.2NP_080581.1  elongin-B

      See identical proteins and their annotated locations for NP_080581.1

      Status: PROVISIONAL

      Source sequence(s)
      AK002868
      Consensus CDS
      CCDS57055.1
      UniProtKB/Swiss-Prot
      P62869
      Related
      ENSMUSP00000066210.5, ENSMUST00000069579.6
      Conserved Domains (1) summary
      cl00155
      Location:1118
      UBQ; Ubiquitin-like proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      23824740..23829109 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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