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    Fbxw28 F-box and WD-40 domain protein 28 [ Mus musculus (house mouse) ]

    Gene ID: 668758, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fbxw28provided by MGI
    Official Full Name
    F-box and WD-40 domain protein 28provided by MGI
    Primary source
    MGI:MGI:3779847
    See related
    Ensembl:ENSMUSG00000054087
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9337
    Expression
    Restricted expression toward ovary adult (RPKM 1.4) See more
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    Genomic context

    See Fbxw28 in Genome Data Viewer
    Location:
    9 F2; 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (109151862..109168727, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109322794..109339659, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (109225400..109242173, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene F-box and WD-40 domain protein 14 Neighboring gene predicted gene, 22821 Neighboring gene predicted gene, 25484 Neighboring gene predicted gene, 24641

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    F-box and WD-40 domain protein 28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177419.1NP_001170890.1  F-box and WD-40 domain protein 28 isoform 1

      See identical proteins and their annotated locations for NP_001170890.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the shorter isoform (1).
      Source sequence(s)
      AC164438, AK143322
      Consensus CDS
      CCDS52932.1
      UniProtKB/TrEMBL
      Q3UPQ4
      Related
      ENSMUSP00000107671.3, ENSMUST00000112040.9
      Conserved Domains (1) summary
      pfam12937
      Location:448
      F-box-like; F-box-like
    2. NM_001177420.1NP_001170891.1  F-box and WD-40 domain protein 28 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate terminal exon and differs in the 3' coding region and 3' UTR compared to variant 1. The resulting protein (isoform 2) has a different, longer C-terminus compared to isoform 1.
      Source sequence(s)
      AC164438, BC084592
      Consensus CDS
      CCDS52933.1
      UniProtKB/TrEMBL
      E9Q8A4
      Related
      ENSMUSP00000107670.3, ENSMUST00000112039.7
      Conserved Domains (1) summary
      pfam12937
      Location:448
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      109151862..109168727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006512211.2XP_006512274.1  F-box and WD-40 domain protein 28 isoform X1

      UniProtKB/TrEMBL
      A0A0G2JFZ2
      Related
      ENSMUSP00000143361.2, ENSMUST00000200156.5
      Conserved Domains (1) summary
      pfam12937
      Location:446
      F-box-like
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