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    Peritrophin-15b Peritrophin-15b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50432, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Peritrophin-15bprovided by FlyBase
    Official Full Name
    Peritrophin-15bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040958
    Locus tag
    Dmel_CG31893
    See related
    AllianceGenome:FB:FBgn0040958
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13395; CG31893; Dm15b; Dmel\CG31893; Peritrophi-15b; peritrophin-15b
    Summary
    Predicted to enable chitin binding activity. Predicted to be a structural constituent of peritrophic membrane. Predicted to be located in chitin-based extracellular matrix. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See Peritrophin-15b in Genome Data Viewer
    Location:
    29C1-29C1; 2-32 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8394446..8394940, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8394446..8394940, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Accessory gland protein 29AB Neighboring gene lectin-29Ca Neighboring gene antisense RNA:CR45343 Neighboring gene Peritrophin-15a Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic Identification of Microproteins during the Development of Drosophila melanogaster. Wang Z, et al. J Proteome Res, 2022 Apr 1. PMID 35227063
    2. A novel family of chitin-binding proteins from insect type 2 peritrophic matrix. cDNA sequences, chitin binding activity, and cellular localization. Wijffels G, et al. J Biol Chem, 2001 May 4. PMID 11278497
    3. Peritrophic matrix proteins. Tellam RL, et al. Insect Biochem Mol Biol, 1999 Feb. PMID 10196732
    4. Whole-genome expression plasticity across tropical and temperate Drosophila melanogaster populations from Eastern Australia. Levine MT, et al. Mol Biol Evol, 2011 Jan. PMID 20671040, Free PMC Article
    5. Genetic variation in the shape of cold-survival curves in a single fly population suggests potential for selection from climate variability. Teets NM, et al. J Evol Biol, 2018 Apr. PMID 29345010

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables chitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables structural constituent of peritrophic membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Peritrophin-15b
    Names
    CG31893-PA
    CG31893-PB
    CG31893-PC
    Dm-peritrophin-15b
    Peritrophin-15b-PA
    Peritrophin-15b-PB
    Peritrophin-15b-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      8394446..8394940 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273320.2 → NP_001260249.1  Peritrophin-15b, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260249.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLL9

    2. NM_001273319.2 → NP_001260248.1  Peritrophin-15b, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260248.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PCE2

    3. NM_080243.4 → NP_524982.1  Peritrophin-15b, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524982.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLL9
      Related
      FBpp0079319
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PCE2 M9PCE2
    Q9VLL9 Q9VLL9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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