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    wam wampa [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42755, updated on 11-Sep-2024

    Summary

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    Official Symbol
    wamprovided by FlyBase
    Official Full Name
    wampaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039070
    Locus tag
    Dmel_CG17083
    See related
    AllianceGenome:FB:FBgn0039070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17083; Dmel\CG17083
    Summary
    Predicted to be involved in cilium movement and outer dynein arm assembly. Located in cytosol. Is expressed in adult head; organism; spermatogonium; and spermatozoon. Orthologous to human CCDC63 (coiled-coil domain containing 63). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    94E9-94E9; 3-78 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23286093..23288051, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19111815..19113773, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene oo18 RNA-binding protein Neighboring gene Cell division cycle 16 Neighboring gene uncharacterized protein Neighboring gene big bubble 8 Neighboring gene pointed Neighboring gene long non-coding RNA:CR46090

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wampa is a dynein subunit required for axonemal assembly and male fertility in Drosophila. Bauerly E, et al. Dev Biol, 2020 Jul 15. PMID 32387369, Free PMC Article
    2. The coiled-coil domain containing protein CCDC151 is required for the function of IFT-dependent motile cilia in animals. Jerber J, et al. Hum Mol Genet, 2014 Feb 1. PMID 24067530
    3. Abdominal-B neurons control Drosophila virgin female receptivity. Bussell JJ, et al. Curr Biol, 2014 Jul 21. PMID 24998527, Free PMC Article
    4. Identification of genes that influence gurken expression. Geng C, et al. Fly (Austin), 2007 Sep-Oct. PMID 18836312
    5. Survey of the Ciliary Motility Machinery of Drosophila Sperm and Ciliated Mechanosensory Neurons Reveals Unexpected Cell-Type Specific Variations: A Model for Motile Ciliopathies. Zur Lage P, et al. Front Genet, 2019. PMID 30774648, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    wampa
    Names
    CG17083-PA
    wam-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23286093..23288051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142882.2 → NP_651139.1  wampa [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651139.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VCN4
      Related
      FBpp0083775
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VCN4 Q9VCN4

    Gene LinkOut

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