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    Psmd7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 [ Mus musculus (house mouse) ]

    Gene ID: 17463, updated on 5-Aug-2018

    Summary

    Official Symbol
    Psmd7provided by MGI
    Official Full Name
    proteasome (prosome, macropain) 26S subunit, non-ATPase, 7provided by MGI
    Primary source
    MGI:MGI:1351511
    See related
    Ensembl:ENSMUSG00000039067 Vega:OTTMUSG00000061936
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mov34; Mov-34; AW107203
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 54.8), liver E14 (RPKM 52.0) and 28 other tissues See more
    Orthologs

    Genomic context

    See Psmd7 in Genome Data Viewer
    Location:
    8 D3; 8 54.38 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (107580380..107588482, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (110104280..110112382, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39241 Neighboring gene WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene microRNA 140 Neighboring gene predicted gene, 42040 Neighboring gene predicted gene, 39242 Neighboring gene predicted gene, 34675

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    proteasome complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    proteasome complex ISO
    Inferred from Sequence Orthology
    more info
     
    proteasome regulatory particle IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    26S proteasome non-ATPase regulatory subunit 7
    Names
    26S proteasome regulatory subunit S12
    26S proteasome regulatory subunit rpn8
    proteasome subunit p40

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010817.2NP_034947.1  26S proteasome non-ATPase regulatory subunit 7

      See identical proteins and their annotated locations for NP_034947.1

      Status: VALIDATED

      Source sequence(s)
      AC134855, AW492454, BC130014
      Consensus CDS
      CCDS22650.1
      UniProtKB/Swiss-Prot
      P26516
      UniProtKB/TrEMBL
      A1L3B8
      Related
      ENSMUSP00000041968.4, OTTMUSP00000078384, ENSMUST00000044106.5, OTTMUST00000151148
      Conserved Domains (2) summary
      cd08062
      Location:7285
      MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8
      PLN03246
      Location:6284
      PLN03246; 26S proteasome regulatory subunit; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      107580380..107588482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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