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    Prr5 proline rich 5 (renal) [ Mus musculus (house mouse) ]

    Gene ID: 109270, updated on 23-Jun-2021

    Summary

    Official Symbol
    Prr5provided by MGI
    Official Full Name
    proline rich 5 (renal)provided by MGI
    Primary source
    MGI:MGI:1924714
    See related
    Ensembl:ENSMUSG00000036106
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pro; C78947; Arhgap8; Protor1; AU043908; Protor-1; C030017C09Rik
    Expression
    Broad expression in genital fat pad adult (RPKM 17.2), duodenum adult (RPKM 16.7) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Prr5 in Genome Data Viewer
    Location:
    15; 15 E2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (84547407..84590610)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (84663206..84706409)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (84511428..84534103)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34095 Neighboring gene predicted gene, 34201 Neighboring gene predicted gene, 53905 Neighboring gene predicted gene, 41374 Neighboring gene predicted gene, 20556 Neighboring gene Rho GTPase activating protein 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Clone Names

    • MGC32512

    General protein information

    Preferred Names
    proline-rich protein 5
    Names
    protein observed with Rictor-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001346662.1NP_001333591.1  proline-rich protein 5 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK046057, AL611986, AL611987
      Consensus CDS
      CCDS84185.1
      UniProtKB/Swiss-Prot
      Q812A5
      Conserved Domains (1) summary
      pfam08539
      Location:31150
      HbrB; HbrB-like
    2. NM_146061.4NP_666173.4  proline-rich protein 5 isoform 1

      See identical proteins and their annotated locations for NP_666173.4

      Status: VALIDATED

      Source sequence(s)
      AK028831, AK081231, AV002324, BE653785, BF458163, BG079574, BY059925, W99003
      Consensus CDS
      CCDS27711.1
      UniProtKB/Swiss-Prot
      Q812A5
      Related
      ENSMUSP00000066396.5, ENSMUST00000065499.5
      Conserved Domains (1) summary
      pfam08539
      Location:40159
      HbrB; HbrB-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      84547407..84590610
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006520279.2XP_006520342.2  proline-rich protein 5 isoform X1

      Conserved Domains (1) summary
      pfam08539
      Location:163
      HbrB; HbrB-like
    2. XM_030248272.1XP_030104132.1  proline-rich protein 5 isoform X2

      Conserved Domains (1) summary
      pfam08539
      Location:31150
      HbrB; HbrB-like
    3. XM_006520281.5XP_006520344.1  proline-rich protein 5 isoform X2

      See identical proteins and their annotated locations for XP_006520344.1

      UniProtKB/Swiss-Prot
      Q812A5
      Related
      ENSMUSP00000127890.2, ENSMUST00000171460.8
      Conserved Domains (1) summary
      pfam08539
      Location:31150
      HbrB; HbrB-like
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