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LOAG_08792 U6 snRNA-associated Sm-family protein LSm [ Loa loa (eye worm) ]

Gene ID: 9946219, updated on 9-Nov-2023

Summary

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Gene symbol
LOAG_08792
Gene description
U6 snRNA-associated Sm-family protein LSm
Locus tag
LOAG_08792
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Loa loa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Loa
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_018108444.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene UMP-CMP kinase Neighboring gene NADH-ubiquinone oxidoreductase 17.3 kDa subunit Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018108444.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Lsm1-7-Pat1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U6 snRNA-associated Sm-family protein LSm

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_018108444.1 Reference assembly

    Range
    73713..75012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003144322.2 → XP_003144370.1  U6 snRNA-associated Sm-family protein LSm [Loa loa]

    See identical proteins and their annotated locations for XP_003144370.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1I7VBB9, A0A1S0TT31
    Conserved Domains (1) summary
    cd01728
    Location:8 → 81
    LSm1; Like-Sm protein 1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases