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OT_ostta05g02650 Thioredoxin-like fold [ Ostreococcus tauri ]

Gene ID: 9834589, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta05g02650
Gene description
Thioredoxin-like fold
Locus tag
OT_ostta05g02650
Gene type
protein coding
RNA name
Thioredoxin-like fold
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot05g02760
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_014430.2 (434853..436400)

Chromosome 5 - NC_014430.2Genomic Context describing neighboring genes Neighboring gene unnamed product Neighboring gene P-loop containing nucleoside triphosphate hydrolase Neighboring gene Twin-arginine translocation pathway, signal sequence Neighboring gene Peptidase S1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014430.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein disulfide isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to endoplasmic reticulum stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Thioredoxin-like fold

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014430.2 Reference assembly

    Range
    434853..436400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003079325.1 → XP_003079373.1  Thioredoxin-like fold [Ostreococcus tauri]

    See identical proteins and their annotated locations for XP_003079373.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y5IEF7, Q018Z4
    Conserved Domains (5) summary
    cd02961
    Location:61 → 160
    PDI_a_family; Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI ...
    cd02981
    Location:171 → 258
    PDI_b_family; Protein Disulfide Isomerase (PDIb) family, redox inactive TRX-like domain b; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02995
    Location:394 → 495
    PDI_a_PDI_a'_C; PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein ...
    TIGR01130
    Location:58 → 497
    ER_PDI_fam; protein disulfide isomerase, eukaryotic
    cl00388
    Location:279 → 374
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
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