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ST18 ST18 C2H2C-type zinc finger transcription factor [ Homo sapiens (human) ]

Gene ID: 9705, updated on 3-Oct-2024

Summary

Official Symbol
ST18provided by HGNC
Official Full Name
ST18 C2H2C-type zinc finger transcription factorprovided by HGNC
Primary source
HGNC:HGNC:18695
See related
Ensembl:ENSG00000147488 MIM:617155; AllianceGenome:HGNC:18695
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NZF3; NZF-3; ZNF387; ZC2H2C3; ZC2HC10
Summary
Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in cytokine-mediated signaling pathway; negative regulation of cell population proliferation; and positive regulation of nitrogen compound metabolic process. Located in nucleus. Part of protein-DNA complex. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in brain (RPKM 3.7), stomach (RPKM 0.7) and 3 other tissues See more
Orthologs
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Genomic context

See ST18 in Genome Data Viewer
Location:
8q11.23
Exon count:
36
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (52110838..52409879, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (52486561..52785956, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (53023398..53322439, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27339 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27340 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27341 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:52837590-52838789 Neighboring gene PCMTD1 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19187 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27342 Neighboring gene uncharacterized LOC124901944 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27343 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:52959497-52959996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:53013330-53014276 Neighboring gene uncharacterized LOC124901945 Neighboring gene uncharacterized LOC101929341 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:53125987-53126195 Neighboring gene VISTA enhancer hs698 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103338 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27344 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27345 Neighboring gene MPRA-validated peak7016 silencer Neighboring gene ribosomal protein L34 pseudogene 17 Neighboring gene ST18-FAM150A intergenic CAGE-defined low expression enhancer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:53458378-53459577 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:53476246-53477222 Neighboring gene MPRA-validated peak7018 silencer Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr8:53512288-53512788 Neighboring gene ALK and LTK ligand 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:53541841-53542555 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:53566637-53567138 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:53567139-53567638 Neighboring gene RB1 inducible coiled-coil 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19188 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19189 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19190 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19191

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • KIAA0535

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-DNA complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
suppression of tumorigenicity 18 protein
Names
ST18, C2H2C-type zinc finger
neural zinc finger transcription factor 3
suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
suppression of tumorigenicity 18, zinc finger
zinc finger protein 387

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001352826.2NP_001339755.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  2. NM_001352827.2NP_001339756.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  3. NM_001352828.2NP_001339757.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Related
    ENSP00000514122.1, ENST00000699087.1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  4. NM_001352829.2NP_001339758.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  5. NM_001352830.2NP_001339759.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  6. NM_001352831.2NP_001339760.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Related
    ENSP00000508476.1, ENST00000693301.1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  7. NM_001352832.2NP_001339761.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  8. NM_001352833.2NP_001339762.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  9. NM_001352834.2NP_001339763.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  10. NM_001352835.2NP_001339764.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  11. NM_001352836.2NP_001339765.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (12) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  12. NM_001352837.2NP_001339766.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (13) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Related
    ENSP00000509475.1, ENST00000689386.1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  13. NM_001352838.2NP_001339767.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (14) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915, AC103831
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  14. NM_001352839.2NP_001339768.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (15) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  15. NM_001352840.2NP_001339769.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (16) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  16. NM_001352841.2NP_001339770.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (17) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  17. NM_001352842.2NP_001339771.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (18) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  18. NM_001352843.2NP_001339772.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (19) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  19. NM_001352844.2NP_001339773.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (20) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  20. NM_001352845.2NP_001339774.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (21) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  21. NM_001352846.2NP_001339775.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (22) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  22. NM_001352847.2NP_001339776.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (23) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  23. NM_001352848.2NP_001339777.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (24) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  24. NM_001352849.2NP_001339778.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (25) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  25. NM_001352850.2NP_001339779.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (26) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  26. NM_001352851.2NP_001339780.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (27) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  27. NM_001352852.2NP_001339781.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (28) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  28. NM_001352853.2NP_001339782.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (29) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  29. NM_001352854.2NP_001339783.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (30) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  30. NM_001352855.2NP_001339784.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (31) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  31. NM_001352856.2NP_001339785.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (32) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  32. NM_001352857.2NP_001339786.1  suppression of tumorigenicity 18 protein isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (33) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AC021915
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  33. NM_001352858.2NP_001339787.1  suppression of tumorigenicity 18 protein isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (43) encodes isoform c. Variants 43-45 all encode isoform c.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:738766
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:450686
    MYT1; Myelin transcription factor 1
    cl25732
    Location:892963
    SMC_N; RecF/RecN/SMC N terminal domain
  34. NM_001352859.2NP_001339788.1  suppression of tumorigenicity 18 protein isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (44) encodes isoform c. Variants 43-45 all encode isoform c.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:738766
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:450686
    MYT1; Myelin transcription factor 1
    cl25732
    Location:892963
    SMC_N; RecF/RecN/SMC N terminal domain
  35. NM_001352860.2NP_001339789.1  suppression of tumorigenicity 18 protein isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (45) encodes isoform c. Variants 43-45 all encode isoform c.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:738766
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:450686
    MYT1; Myelin transcription factor 1
    cl25732
    Location:892963
    SMC_N; RecF/RecN/SMC N terminal domain
  36. NM_001352861.2NP_001339790.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (34) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  37. NM_001352862.2NP_001339791.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (35) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  38. NM_001352863.2NP_001339792.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (36) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  39. NM_001352864.2NP_001339793.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (37) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  40. NM_001352865.2NP_001339794.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (38) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  41. NM_001352866.2NP_001339795.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (39) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  42. NM_001352867.2NP_001339796.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (40) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  43. NM_001352868.2NP_001339797.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (41) encodes isoform b. Variants 34-42 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  44. NM_001352869.2NP_001339798.1  suppression of tumorigenicity 18 protein isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (42) encodes isoform b. Variants 46-51 all encode isoform b.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:732760
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:444680
    MYT1; Myelin transcription factor 1
    cl25732
    Location:886957
    SMC_N; RecF/RecN/SMC N terminal domain
  45. NM_001352870.2NP_001339799.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (46) encodes isoform d. Variants 46-51 all encode isoform d.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  46. NM_001352871.2NP_001339800.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (47) encodes isoform d. Variants 46-51 all encode isoform d.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  47. NM_001352872.2NP_001339801.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (48) encodes isoform d. Variants 34-42 all encode isoform d.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  48. NM_001352873.2NP_001339802.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (49) encodes isoform d. Variants 46-51 all encode isoform d.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  49. NM_001352874.2NP_001339803.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (50) encodes isoform d. Variants 46-51 all encode isoform d.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  50. NM_001352875.2NP_001339804.1  suppression of tumorigenicity 18 protein isoform d

    Status: VALIDATED

    Description
    Transcript Variant: This variant (51) encodes isoform d. Variants 46-51 all encode isoform d.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:685713
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479633
    MYT1; Myelin transcription factor 1
    cl25732
    Location:839910
    SMC_N; RecF/RecN/SMC N terminal domain
  51. NM_001352876.2NP_001339805.1  suppression of tumorigenicity 18 protein isoform f

    Status: VALIDATED

    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:421449
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:215369
    MYT1; Myelin transcription factor 1
    cl25732
    Location:575646
    SMC_N; RecF/RecN/SMC N terminal domain
  52. NM_001352877.2NP_001339806.1  suppression of tumorigenicity 18 protein isoform e

    Status: VALIDATED

    Description
    Transcript Variant: This variant (52) encodes isoform e. Variants 52 and 53 both encode isoform e.
    Source sequence(s)
    AC021915, AC103831
    Conserved Domains (3) summary
    pfam01530
    Location:414442
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:126362
    MYT1; Myelin transcription factor 1
    cl25732
    Location:568639
    SMC_N; RecF/RecN/SMC N terminal domain
  53. NM_001352878.2NP_001339807.1  suppression of tumorigenicity 18 protein isoform e

    Status: VALIDATED

    Description
    Transcript Variant: This variant (53) encodes isoform e. Variants 52 and 53 both encode isoform e.
    Source sequence(s)
    AC021915
    Conserved Domains (3) summary
    pfam01530
    Location:414442
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:126362
    MYT1; Myelin transcription factor 1
    cl25732
    Location:568639
    SMC_N; RecF/RecN/SMC N terminal domain
  54. NM_001352879.1NP_001339808.1  suppression of tumorigenicity 18 protein isoform g

    Status: VALIDATED

    Description
    Transcript Variant: This variant (55) encodes isoform g. Variants 55-58 all encode isoform g.
    Source sequence(s)
    AC103831
  55. NM_001352880.1NP_001339809.1  suppression of tumorigenicity 18 protein isoform g

    Status: VALIDATED

    Description
    Transcript Variant: This variant (56) encodes isoform g. Variants 55-58 all encode isoform g.
    Source sequence(s)
    AC103831
  56. NM_001352881.1NP_001339810.1  suppression of tumorigenicity 18 protein isoform g

    Status: VALIDATED

    Description
    Transcript Variant: This variant (57) encodes isoform g. Variants 55-58 all encode isoform g.
    Source sequence(s)
    AC021915, AC103831
  57. NM_001352882.1NP_001339811.1  suppression of tumorigenicity 18 protein isoform g

    Status: VALIDATED

    Description
    Transcript Variant: This variant (58) encodes isoform g. Variants 55-58 all encode isoform g.
    Source sequence(s)
    AC103831
  58. NM_001352883.2NP_001339812.1  suppression of tumorigenicity 18 protein isoform h

    Status: VALIDATED

    Description
    Transcript Variant: This variant (59) encodes isoform h. Variants 59 and 60 both encode isoform h.
    Source sequence(s)
    AC103831
    Related
    ENST00000522102.5
  59. NM_001352884.2NP_001339813.1  suppression of tumorigenicity 18 protein isoform h

    Status: VALIDATED

    Description
    Transcript Variant: This variant (60) encodes isoform h. Variants 59 and 60 both encode isoform h.
    Source sequence(s)
    AC103831
  60. NM_014682.3NP_055497.1  suppression of tumorigenicity 18 protein isoform a

    See identical proteins and their annotated locations for NP_055497.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform a. Variants 1-33 all encode isoform a.
    Source sequence(s)
    AB011107, BC117147, BQ639545, DA288225
    Consensus CDS
    CCDS6149.1
    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Related
    ENSP00000276480.7, ENST00000276480.11
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain

RNA

  1. NR_148195.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC021915, AC103831
  2. NR_148196.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC021915

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    52110838..52409879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047422485.1XP_047278441.1  suppression of tumorigenicity 18 protein isoform X2

  2. XM_047422486.1XP_047278442.1  suppression of tumorigenicity 18 protein isoform X2

  3. XM_047422487.1XP_047278443.1  suppression of tumorigenicity 18 protein isoform X2

  4. XM_024447349.2XP_024303117.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  5. XM_047422484.1XP_047278440.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
  6. XM_017014058.2XP_016869547.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
    Conserved Domains (3) summary
    pfam01530
    Location:767795
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:479715
    MYT1; Myelin transcription factor 1
    cl25732
    Location:921992
    SMC_N; RecF/RecN/SMC N terminal domain
  7. XM_024447350.2XP_024303118.1  suppression of tumorigenicity 18 protein isoform X3

    Conserved Domains (3) summary
    pfam01530
    Location:414442
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:126362
    MYT1; Myelin transcription factor 1
    cl25732
    Location:568639
    SMC_N; RecF/RecN/SMC N terminal domain

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    52486561..52785956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054361604.1XP_054217579.1  suppression of tumorigenicity 18 protein isoform X2

  2. XM_054361605.1XP_054217580.1  suppression of tumorigenicity 18 protein isoform X2

  3. XM_054361606.1XP_054217581.1  suppression of tumorigenicity 18 protein isoform X2

  4. XM_054361602.1XP_054217577.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
  5. XM_054361601.1XP_054217576.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
  6. XM_054361603.1XP_054217578.1  suppression of tumorigenicity 18 protein isoform X1

    UniProtKB/Swiss-Prot
    O60284, Q17RY1
  7. XM_054361607.1XP_054217582.1  suppression of tumorigenicity 18 protein isoform X3