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Eint_101250 60S ribosomal protein L42 [ Encephalitozoon intestinalis ATCC 50506 ]

Gene ID: 9699516, updated on 17-May-2024

Summary

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Gene symbol
Eint_101250
Gene description
60S ribosomal protein L42
Locus tag
Eint_101250
See related
MicrosporidiaDB:Eint_101250; VEuPathDB:Eint_101250
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon intestinalis ATCC 50506 (strain: ATCC 50506)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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Location:
chromosome: X
Exon count:
1
Sequence:
Chromosome: X; NC_014424.1 (164579..164893, complement)

Chromosome X - NC_014424.1Genomic Context describing neighboring genes Neighboring gene Ser/Thr protein phosphatase PP4 Neighboring gene iron-sulfur cluster assembly protein CIA2 Neighboring gene ubiquitin conjugating enzyme E2 Neighboring gene SNF2 DNA/RNA helicase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014424.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis. Corradi N, et al. Nat Commun, 2010 Sep 21. PMID 20865802, Free PMC Article
  2. Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites. Pombert JF, et al. Proc Natl Acad Sci U S A, 2012 Jul 31. PMID 22802648, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L42
XP_003073810.1
  • similar to ECU10_1300

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014424.1 Reference assembly

    Range
    164579..164893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003073764.1 → XP_003073810.1  60S ribosomal protein L42 [Encephalitozoon intestinalis ATCC 50506]

    See identical proteins and their annotated locations for XP_003073810.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0S9R5
    Conserved Domains (1) summary
    COG1631
    Location:2 → 94
    RPL42A; Ribosomal protein L44E [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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