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CPC735_001010 AMP dependent ligase/synthetase, putative [ Coccidioides posadasii C735 delta SOWgp ]

Gene ID: 9692418, updated on 21-Dec-2023

Summary

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Gene symbol
CPC735_001010
Gene description
AMP dependent ligase/synthetase, putative
Locus tag
CPC735_001010
Gene type
protein coding
RNA name
AMP dependent ligase/synthetase, putative
RefSeq status
PROVISIONAL
Organism
Coccidioides posadasii C735 delta SOWgp (strain: C735 delta SOWgp)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_003315984.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Protein kinase domain containing protein Neighboring gene hypothetical protein Neighboring gene tryptophan dimethylallyltransferase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315984.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Sharpton TJ, et al. Genome Res, 2009 Oct. PMID 19717792, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid activation for nonribosomal peptide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secondary metabolite biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMP dependent ligase/synthetase, putative
XP_003066902.1
  • encoded by transcript CPC735_001010A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315984.1 Reference assembly

    Range
    240264..245847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003066856.1 → XP_003066902.1  AMP dependent ligase/synthetase, putative [Coccidioides posadasii C735 delta SOWgp]

    See identical proteins and their annotated locations for XP_003066902.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J6FG56, C5PEC9
    Conserved Domains (4) summary
    TIGR01923
    Location:2 → 449
    menE; O-succinylbenzoate-CoA ligase
    pfam00550
    Location:479 → 540
    PP-binding; Phosphopantetheine attachment site
    cl17068
    Location:1 → 450
    AFD_class_I; Adenylate forming domain, Class I superfamily
    cl23853
    Location:1273 → 1552
    Condensation; Condensation domain
Nucleotide Protein
Heading Accession and Version

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