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VOLCADRAFT_78675 uncharacterized protein [ Volvox carteri f. nagariensis ]

Gene ID: 9621825, updated on 10-Jan-2024

Summary

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Gene symbol
VOLCADRAFT_78675
Gene description
uncharacterized protein
Locus tag
VOLCADRAFT_78675
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See VOLCADRAFT_78675 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_003307545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307545.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002946055.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307545.1 Reference assembly

    Range
    1439785..1443342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002946009.1 → XP_002946055.1  uncharacterized protein VOLCADRAFT_78675 [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002946055.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8THD1
    Conserved Domains (4) summary
    cd01769
    Location:20 → 86
    UBL; Ubiquitin-like domain of UBL
    smart00213
    Location:16 → 86
    UBQ; Ubiquitin homologues
    cl02553
    Location:121 → 496
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:120 → 495
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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