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SCHCODRAFT_02490619 Frataxin [ Schizophyllum commune H4-8 ]

Gene ID: 9597550, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_02490619
Gene description
Frataxin
Primary source
FungiDB:SCHCODRAFT_02490619
Locus tag
SCHCODRAFT_02490619
See related
VEuPathDB:SCHCODRAFT_02490619
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_13253
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Genomic context

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See SCHCODRAFT_02490619 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_026089539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Rhodanese-like protein Neighboring gene WD40 repeat-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron incorporation into metallo-sulfur cluster IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Frataxin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089539.1 Reference assembly

    Range
    3140145..3140619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003037060.1 → XP_003037106.1  Frataxin [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003037106.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PN54
    Conserved Domains (1) summary
    pfam01491
    Location:7 → 113
    Frataxin_Cyay; Frataxin-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials