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SCHCODRAFT_02610055 uncharacterized protein [ Schizophyllum commune H4-8 ]

Gene ID: 9594744, updated on 23-Nov-2023

Summary

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Gene symbol
SCHCODRAFT_02610055
Gene description
uncharacterized protein
Locus tag
SCHCODRAFT_02610055
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_73639
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Genomic context

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Location:
chromosome: Unknown
Exon count:
5

NW_026089539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RdRP-domain-containing protein Neighboring gene Sm-like ribonucleoprotein Neighboring gene uncharacterized protein Neighboring gene tRNA-Pro

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089539.1 Reference assembly

    Range
    1066426..1068714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003038826.2 → XP_003038872.1  uncharacterized protein SCHCODRAFT_02610055 [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003038872.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PK65
    Conserved Domains (3) summary
    COG5163
    Location:3 → 626
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
    pfam06732
    Location:8 → 266
    Pescadillo_N; Pescadillo N-terminus
    pfam16589
    Location:354 → 458
    BRCT_2; BRCT domain, a BRCA1 C-terminus domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases