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RCNMVs1gp1 88 kDa protein [ Red clover necrotic mosaic virus ]

Gene ID: 956631, updated on 18-Aug-2023

Summary

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Gene symbol
RCNMVs1gp1
Gene description
88 kDa protein
Locus tag
RCNMVs1gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Red clover necrotic mosaic virus (strain: Australia)
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; Dianthovirus
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Genomic context

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Location:
segment: RNA 1
Sequence:
NC_003756.1 (124..2426)

NC_003756.1Genomic Context describing neighboring genes Neighboring gene 27 kDa protein Neighboring gene 57 kDa protein Neighboring gene 37 kDa capsid protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003756.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential roles of Hsp70 and Hsp90 in the assembly of the replicase complex of a positive-strand RNA plant virus. Mine A, et al. J Virol, 2012 Nov. PMID 22933272, Free PMC Article
  2. Synthesis of the putative red clover necrotic mosaic virus RNA polymerase by ribosomal frameshifting in vitro. Xiong Z, et al. Virology, 1993 Mar. PMID 8438566, Free PMC Article
  3. The complete nucleotide sequence and genome organization of red clover necrotic mosaic virus RNA-1. Xiong Z, et al. Virology, 1989 Aug. PMID 2763465

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Hsp70 and Hsp90 regulate different steps in the assembly of the RCNMV replicase complex
    Title: Differential roles of Hsp70 and Hsp90 in the assembly of the replicase complex of a positive-strand RNA plant virus.
Submit: New GeneRIF Correction

General gene information

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Homology

Miscellaneous features

  • Loc: 821-841 frameshifting region; putative

General protein information

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Preferred Names
88 kDa protein
NP_620523.2
  • putative RNA polymerase; -1 ribosome frameshifting

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003756.1 Reference assembly

    Range
    124..2426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_620523.2 88 kDa protein [Red clover necrotic mosaic virus]

    See identical proteins and their annotated locations for NP_620523.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P22956, P22957, Q86156, Q86157
    UniProtKB/TrEMBL
    Q9QMG1
    Conserved Domains (1) summary
    pfam00998
    Location:260 → 745
    RdRP_3; Viral RNA dependent RNA polymerase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P22956.2

Gene LinkOut

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