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AGOS_AFR451WA AFR451W-Ap [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 9487913, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AFR451WA
Gene description
AFR451W-Ap
Locus tag
AGOS_AFR451WA
Gene type
protein coding
RNA name
AFR451W-Ap
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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Genomic context

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Location:
chromosome: VI
Exon count:
1
Sequence:
Chromosome: VI; NC_005787.5 (1252004..1252966)

Chromosome VI - NC_005787.5Genomic Context describing neighboring genes Neighboring gene AFR451Cp Neighboring gene tRNA-Tyr Neighboring gene AFR452Cp Neighboring gene AFR453Wp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005787.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U6 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 1 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AFR451W-Ap
NP_001342280.1
  • Syntenic homolog of Saccharomyces cerevisiae YDL209C (CWC2)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005787.5 Reference assembly

    Range
    1252004..1252966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001355338.1 → NP_001342280.1  AFR451W-Ap [Eremothecium gossypii ATCC 10895]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8FGE1
    Conserved Domains (2) summary
    pfam16131
    Location:9 → 119
    Torus; Torus domain
    cl17169
    Location:139 → 232
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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