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yjcO Sel1 repeat-containing protein YjcO [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948586, updated on 19-Sep-2024

Summary

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Official Symbol
yjcO
Official Full Name
Sel1 repeat-containing protein YjcO
Primary source
ECOCYC:EG11951
Locus tag
b4078
See related
ASAP:ABE-0013360
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4071
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Genomic context

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Sequence:
NC_000913.3 (4296436..4297125, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative formate-dependent nitrite reductase complex subunit NrfF Neighboring gene putative formate-dependent nitrite reductase complex subunit NrfG Neighboring gene glutamate/aspartate : H(+) symporter GltP Neighboring gene formate dehydrogenase H Neighboring gene putative multidrug efflux pump outer membrane channel Neighboring gene putative multidrug efflux pump subunit MdtO

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article
  2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Sel1 repeat-containing protein YjcO

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4296436..4297125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418502.1 Sel1 repeat-containing protein YjcO [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418502.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1MNI1, A0A376X6M3
    Conserved Domains (2) summary
    COG0790
    Location:4 → 229
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:50 → 79
    SLR; SLR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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